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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85618174_85619435_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

85618174 - 85619435

Intron Length:

1262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ATAAATATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

64.6

0.33

60.3

44.7

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

64.8

0.54

1.7

85.72

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018887

85612091 - 85620203

8113