Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_85627530_85628008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85627530 - 85628008

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGTATC

5'SS Class:

major

3'SS Sequence:

GTTTTTGTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

GTTTTTGTCATA

Flanking Amino Acid:

HYLRHSRYLPGVNTRNSLVS

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

79.1

34.4

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

76.9

0.61

0.9

72.4

37.8

Minor 5ss

36.8

-1.5

2.7

44.7

36.8

Minor BPS

45.4

-0.3

2.3

62.57

38.8

Associated Gene:

Gene:

ICK

Ensembl Gene ID:

ENSAPLG00000004572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004730

85622106 - 85649561

27456