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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85645408_85649471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

85645408 - 85649471

Intron Length:

4064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

GGGTGCAGAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

62.4

0.31

32.1

Major PPT

80.6

0.69

0.9

76.9

37.3

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

41.6

-0.5

2.1

57.17

44.4

Associated Gene:

Gene:

ICK

Ensembl Gene ID:

ENSAPLG00000004572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004730

85622106 - 85649561

27456