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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85679440_85681682_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85679440 - 85681682

Intron Length:

2243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTTCCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TTTCACTAAACC

Flanking Amino Acid:

PRLKRLQEIKSLTGEMPTQQ

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

71.7

0.49

70.6

33.8

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

62.1

0.36

1.9

77.25

38.5

Associated Gene:

Gene:

GCM1

Ensembl Gene ID:

ENSAPLG00000004160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004262

85678879 - 85685980

7102