Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_85711804_85713671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85711804 - 85713671

Intron Length:

1868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

GTTTATTTATTT

Flanking Amino Acid:

WKKYITQGQLTQFVLTIFQT

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

87.1

0.84

0.7

80.8

31.2

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

58.5

0.34

1.8

77.47

39.3

Associated Gene:

Gene:

ELOVL5

Ensembl Gene ID:

ENSAPLG00000003669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003757

85710070 - 85731403

21334

ENSAPLT00000033965

85708327 - 85725042

16716