Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_85713797_85715301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85713797 - 85715301

Intron Length:

1505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTGCTCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

CGCACTGTACTT

Flanking Amino Acid:

FVMNWVPCGHSYFGATLNSF

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

83.4

0.75

0.7

81.7

30.3

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

40.7

-0.6

2.1

52.11

43.6

Associated Gene:

Gene:

ELOVL5

Ensembl Gene ID:

ENSAPLG00000003669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003757

85710070 - 85731403

21334

ENSAPLT00000033965

85708327 - 85725042

16716