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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85779432_85782356_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85779432 - 85782356

Intron Length:

2925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AATTTCACAAAT

Flanking Amino Acid:

KLDFLIPLSKVDENMKVAQK

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

94.6

0.6

88.2

29.1

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

48.8

-0

1.9

70.44

39.6

Associated Gene:

Gene:

GCLC

Ensembl Gene ID:

ENSAPLG00000003104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040450

85764278 - 85806147

41870

ENSAPLT00000020949

85774056 - 85851289

77234

ENSAPLT00000003193

85774056 - 85824291

50236