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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85783291_85783990_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

85783291 - 85783990

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGTATCT

5'SS Class:

weak_major

3'SS Sequence:

ATGTGCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTTTCATGT

Flanking Amino Acid:

DDANESDHFENIQSTNWQTM

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.2

39.5

Major BPS

100

1.24

0.5

100

Major PPT

76.8

0.6

69.9

40.9

Minor 5ss

35.6

-1.6

3.2

49.6

46.2

Minor BPS

49.1

0.01

75.13

42.3

Associated Gene:

Gene:

GCLC

Ensembl Gene ID:

ENSAPLG00000003104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020949

85774056 - 85851289

77234

ENSAPLT00000003193

85774056 - 85824291

50236

ENSAPLT00000040450

85764278 - 85806147

41870