Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_85862013_85862915_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85862013 - 85862915

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGATTTCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTTGTTTGATT

Flanking Amino Acid:

SSLPYAADFKVPVVEAPQQV

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

76.2

39.9

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

73.1

0.52

0.9

66.2

40.6

Minor 5ss

35.6

-1.6

2.7

37.6

Minor BPS

67.2

0.62

1.7

86.34

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002982

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003022

85851053 - 85868521

17469