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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85863758_85864550_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

85863758 - 85864550

Intron Length:

793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAACTCT

5'SS Class:

major

3'SS Sequence:

TGTTCAAACCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTGATCTTAAAA

Flanking Amino Acid:

QLFRIEDCNPTFTEVSDHLW

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

40.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

53.9

0.09

1.1

51.1

41.2

Minor 5ss

46.3

-0.4

66.2

44.8

Minor BPS

66.7

0.52

1.4

73.09

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002982

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003022

85851053 - 85868521

17469