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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85865370_85868027_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85865370 - 85868027

Intron Length:

2658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTGGTTTTAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATCTCTTTATTT

Flanking Amino Acid:

VTQLHPTEKCKTQISESRDR

Intron Amino Acid Position:

565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.5

28.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

61.9

0.27

1.2

63.7

40.9

Minor 5ss

-1.2

3.3

52.8

38.5

Minor BPS

64.9

0.55

1.6

77.64

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002982

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003022

85851053 - 85868521

17469