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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85899511_85914535_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85899511 - 85914535

Intron Length:

15025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ATCTTCTGACAT

Flanking Amino Acid:

DANQLRELPKPFFQLVKLRK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

48.7

-0

1.8

67.97

42.7

Associated Gene:

Gene:

LRRC1

Ensembl Gene ID:

ENSAPLG00000002577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002631

85899352 - 85966915

67564