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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85914654_85929283_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85914654 - 85929283

Intron Length:

14630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

QLVELDLSRNDIPEIPESIS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

88.4

0.86

0.6

84.8

22.8

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

LRRC1

Ensembl Gene ID:

ENSAPLG00000002577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002631

85899352 - 85966915

67564