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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85964852_85966756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85964852 - 85966756

Intron Length:

1905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ACTTATTGCACT

Flanking Amino Acid:

DEKDEEDNEMRTLLRRATPH

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

82.3

31.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.6

0.76

0.8

82.1

34.6

Minor 5ss

58.3

0.28

2.3

72.3

Minor BPS

46.9

-0.1

67.92

42.9

Associated Gene:

Gene:

LRRC1

Ensembl Gene ID:

ENSAPLG00000002577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002631

85899352 - 85966915

67564