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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86123235_86127451_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86123235 - 86127451

Intron Length:

4217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTTATGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATTTTTTTACAT

Flanking Amino Acid:

SDEPWPPPTSGCYKDGRYYG

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

83.2

30.8

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

69.9

0.45

1.1

65.3

45.4

Minor 5ss

32.5

-2

3.1

41.3

45.3

Minor BPS

60.3

0.4

1.7

78.79

37.6

Associated Gene:

Gene:

TINAG

Ensembl Gene ID:

ENSAPLG00000015513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033438

86119050 - 86146159

27110

ENSAPLT00000016197

86122865 - 86167037

44173