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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86127516_86128529_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86127516 - 86128529

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAACGTTT

5'SS Class:

major

3'SS Sequence:

CTTGCCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTCTGCTCAATG

Flanking Amino Acid:

GTIIKDNCNSCKCFQSNWKC

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

72.2

39.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

81.1

0.7

0.8

77.3

31.4

Minor 5ss

48.4

-0.1

3.2

69.9

42.9

Minor BPS

52.9

-0

2.1

63.16

45.2

Associated Gene:

Gene:

TINAG

Ensembl Gene ID:

ENSAPLG00000015513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033438

86119050 - 86146159

27110

ENSAPLT00000016197

86122865 - 86167037

44173