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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86128620_86130251_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

86128620 - 86130251

Intron Length:

1632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGAATA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTGAGGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTCAAA

U12 Branch Point Sequence:

TGTTTGTGAGGA

Flanking Amino Acid:

LIQNINSGDYGWKADNYSQF

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

76.9

33.7

Major BPS

55.1

0.13

1.3

64.9

38.5

Major PPT

50.8

0.02

1.3

52.9

45.4

Minor 5ss

31.2

-2.2

32.2

42.1

Minor BPS

40.7

-0.7

2.4

56.34

42.9

Associated Gene:

Gene:

TINAG

Ensembl Gene ID:

ENSAPLG00000015513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033438

86119050 - 86146159

27110

ENSAPLT00000016197

86122865 - 86167037

44173