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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86145935_86146443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86145935 - 86146443

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

CTTTCCTTGCTT

Flanking Amino Acid:

CGSHYRVSSKETDIMEEIMD

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

75.6

0.58

0.7

72.9

25.3

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

0.01

3.5

82.57

39.6

Associated Gene:

Gene:

TINAG

Ensembl Gene ID:

ENSAPLG00000015513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016197

86122865 - 86167037

44173