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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86209795_86215708_F

Intron Information:

Intron Rank:

146833

Intron Class:

major

Intron Phase:

Intron Coordinates:

86209795 - 86215708

Intron Length:

5914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAA

U12 Branch Point Sequence:

TCTCTCTTCAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.8

35.3

Major BPS

62.3

0.31

1.4

63.7

43.9

Major PPT

76.7

0.6

75.4

33.4

Minor 5ss

35.2

-1.7

2.7

39.5

40.9

Minor BPS

48.6

-0.2

1.9

57.38

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043962

86209064 - 86227433

18370