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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86209795_86229105_F

Intron Information:

Intron Rank:

146830

Intron Class:

major

Intron Phase:

Intron Coordinates:

86209795 - 86229105

Intron Length:

19311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCTCTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TATTTCCTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.8

35.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

75.3

0.57

31.7

Minor 5ss

35.2

-1.7

2.7

39.5

40.9

Minor BPS

55.1

0.24

1.9

77.44

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029958

86209064 - 86229193

20130