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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86483843_86486559_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

86483843 - 86486559

Intron Length:

2717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACTGCAC

5'SS Class:

weak_major

3'SS Sequence:

CCTTATCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTCATCTTAAAA

Flanking Amino Acid:

LTNINTIPANGITATLSPLK

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.21

1.2

48.2

42.2

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

82.5

0.73

0.8

75.9

32.4

Minor 5ss

30.5

-2.2

3.5

41.9

Minor BPS

66.6

0.52

1.4

72.98

38.7

Associated Gene:

Gene:

HCRTR2

Ensembl Gene ID:

ENSAPLG00000015204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015863

86445609 - 86487389

41781