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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86499645_86554041_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86499645 - 86554041

Intron Length:

54397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCAA

5'SS Class:

major

3'SS Sequence:

ATATCGTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ATATCGTTGACA

Flanking Amino Acid:

ALANILTAIQEYQWKAVKMK

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

66.6

0.37

1.1

61.3

43.9

Minor 5ss

30.1

-2.3

3.2

38.5

46.5

Minor BPS

0.34

2.1

73.53

Associated Gene:

Gene:

HMGCLL1

Ensembl Gene ID:

ENSAPLG00000014814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017672

86499468 - 86602285

102818