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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86506986_86509402_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
86506986 - 86509402

Intron Length:
2417

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAC|GTGAGTAAC

5'SS Class:
major

3'SS Sequence:
TGCCAATATTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TAATATTTAAAA

Flanking Amino Acid:
LHSTTCFSELRQISIKKKGF

Intron Amino Acid Position:
461

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1.2
77.5
32.9

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
66.8
0.38
1
62.6
42.2

Minor 5ss
32
-2.1
2.7
35.9
33.5

Minor BPS
59.9
0.31
1.6
68.13
37.3

Associated Gene:

Gene:
GFRAL

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

86491216 - 86517084
25869