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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86530220_86552303_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86530220 - 86552303

Intron Length:

22084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTAATTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTGTTGTAATT

Flanking Amino Acid:

YASSSLAWSEDGSCCSGFIR

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.8

78.8

35.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

0.65

69.6

45.6

Minor 5ss

35.5

-1.6

2.8

45.4

42.6

Minor BPS

49.4

0.03

2.1

71.21

40.9

Associated Gene:

Gene:

HMGCLL1

Ensembl Gene ID:

ENSAPLG00000014814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025727

86530094 - 86602285

72192