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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86551735_86552303_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86551735 - 86552303

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTCCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TATATTGTATTT

Flanking Amino Acid:

YASSSLAWSEELMNDSWKAT

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.8

78.8

35.5

Major BPS

64.1

0.35

1.2

45.5

Major PPT

67.9

0.4

1.1

38.2

Minor 5ss

35.5

-1.6

2.8

45.4

42.6

Minor BPS

44.6

-0.3

2.1

64.72

40.6

Associated Gene:

Gene:

HMGCLL1

Ensembl Gene ID:

ENSAPLG00000014814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033897

86551229 - 86602285

51057