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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86554231_86573733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86554231 - 86573733

Intron Length:

19503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTAACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CTTTTTTTAACC

Flanking Amino Acid:

TPNLQGFHNAVSKRLYSMGC

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.4

36.6

Major BPS

87.3

0.93

0.8

36.5

Major PPT

82.9

0.74

0.9

78.8

38.7

Minor 5ss

35.9

-1.6

3.2

51.5

44.9

Minor BPS

78.8

0.88

1.1

81.25

33.5

Associated Gene:

Gene:

HMGCLL1

Ensembl Gene ID:

ENSAPLG00000014814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043692

86525517 - 86602285

76769