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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8662096_8663709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8662096 - 8663709

Intron Length:

1614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

GTCCACTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TTGGGTTTCACC

Flanking Amino Acid:

HGAVILHVLCVLPYLCACPL

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.8

34.4

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

0.52

0.9

65.6

35.7

Minor 5ss

48.1

-0.2

2.8

68.1

42.7

Minor BPS

46.4

-0.3

2.2

61.04

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027548

8543016 - 8664962

121947