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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86697842_86720379_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86697842 - 86720379

Intron Length:

22538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTCGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTCTCTTTAATT

Flanking Amino Acid:

ADMVMSFVNLVERDKDFSHQ

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

68.9

43.8

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

84.4

0.77

0.8

81.1

29.5

Minor 5ss

32.2

-2

3.1

41.2

45.1

Minor BPS

77.9

0.95

1.1

84.22

37.1

Associated Gene:

Gene:

BMP5

Ensembl Gene ID:

ENSAPLG00000014765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015395

86667816 - 86720863

53048