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Intron Name: Anas_platyrhynchos_platyrhynchos_3_86863920_86865889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

86863920 - 86865889

Intron Length:

1970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GTTCACTAAAAT

Flanking Amino Acid:

ISAEDGETRASCRTAPADLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

84.6

33.2

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

79.6

0.67

0.8

77.7

36.7

Minor 5ss

41.9

-0.9

3.1

59.6

38.8

Minor BPS

0.08

73.06

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003544

86850473 - 86865977

15505