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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8695313_8701045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8695313 - 8701045

Intron Length:

5733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CCTCTTTTAAAA

Flanking Amino Acid:

YTLSVVALIVFIYDEKVSWW

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.7

0.71

0.7

76.2

25.9

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

56.1

0.19

1.4

60.98

39.4

Associated Gene:

Gene:

RIN2

Ensembl Gene ID:

ENSAPLG00000014865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025864

8694950 - 8840228

145279

ENSAPLT00000018188

8694950 - 8840228

145279

ENSAPLT00000013593

8694950 - 8840228

145279

ENSAPLT00000036550

8694950 - 8840228

145279