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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8703195_8703886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8703195 - 8703886

Intron Length:

692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTGTTTCATT

Flanking Amino Acid:

PLQQFTGQHSRYNSTIHHCF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

80.3

0.68

0.9

76.3

37.6

Minor 5ss

43.8

-0.7

2.8

58.6

45.8

Minor BPS

51.6

0.13

2.2

75.88

41.7

Associated Gene:

Gene:

RIN2

Ensembl Gene ID:

ENSAPLG00000014865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024235

8703119 - 8840228

137110