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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8704021_8706581_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8704021 - 8706581

Intron Length:

2561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTCTCTTCATTT

Flanking Amino Acid:

CDATVVLLKKGNFHRKASVI

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

1.1

85.2

32.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

78.7

0.65

0.9

72.9

37.4

Minor 5ss

44.2

-0.6

3.3

66.9

44.4

Minor BPS

55.9

0.26

1.8

75.55

42.1

Associated Gene:

Gene:

RIN2

Ensembl Gene ID:

ENSAPLG00000014865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025864

8694950 - 8840228

145279

ENSAPLT00000024235

8703119 - 8840228

137110

ENSAPLT00000018188

8694950 - 8840228

145279

ENSAPLT00000013593

8694950 - 8840228

145279

ENSAPLT00000036550

8694950 - 8840228

145279