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Intron Name: Anas_platyrhynchos_platyrhynchos_3_87110872_87110977_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

87110872 - 87110977

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTATGTATT

5'SS Class:

major

3'SS Sequence:

TGTCTGGAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTGTCTGGAAAA

Flanking Amino Acid:

NITRKKEYHAELMRELDQKE

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

77.6

36.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

49.4

-0

1.2

49.3

42.3

Minor 5ss

-0

2.5

74.1

35.5

Minor BPS

47.6

-0.1

2.2

65.19

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020378

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038765

87097706 - 87113950

16245