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Intron Name: Anas_platyrhynchos_platyrhynchos_3_87281784_87282720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87281784 - 87282720

Intron Length:

937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAGAT

U12 Branch Point Sequence:

GTTGCTGTAGAT

Flanking Amino Acid:

SEDSDLDKEQREPYSGSNFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

0.35

1.2

60.7

45.9

Major PPT

86.6

0.82

0.8

84.6

30.3

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

43.8

-0.3

2.3

65.54

45.1

Associated Gene:

Gene:

BEND6

Ensembl Gene ID:

ENSAPLG00000003662

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003740

87281664 - 87292590

10927