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Intron Name: Anas_platyrhynchos_platyrhynchos_3_87353728_87354604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87353728 - 87354604

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTAAATTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTGTCTTTAAAT

Flanking Amino Acid:

ELVHTSSNKIGVFNTAAGSH

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

72.4

0.5

0.9

66.8

39.9

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

78.5

0.97

1.3

89.08

35.6

Associated Gene:

Gene:

RAB23

Ensembl Gene ID:

ENSAPLG00000003715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003827

87353588 - 87363910

10323