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Intron Name: Anas_platyrhynchos_platyrhynchos_3_87357717_87362860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87357717 - 87362860

Intron Length:

5144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAAATA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GCATTTGTAATT

Flanking Amino Acid:

FDAITKAYYRGAQACVLVFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

0.9

79.3

28.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.1

0.61

0.9

74.4

40.4

Minor 5ss

-2.2

3.1

39.7

45.8

Minor BPS

48.8

-0

64.21

41.1

Associated Gene:

Gene:

RAB23

Ensembl Gene ID:

ENSAPLG00000003715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003827

87353588 - 87363910

10323