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Intron Name: Anas_platyrhynchos_platyrhynchos_3_87392771_87393090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87392771 - 87393090

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

ATGTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

GTTCTCTGAAAT

Flanking Amino Acid:

EFRRLKFPYRALAEDDYDAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

80.8

33.6

Major BPS

71.6

0.54

33.1

Major PPT

81.8

0.72

0.8

77.7

Minor 5ss

40.6

-1.1

2.8

47.9

41.8

Minor BPS

59.6

0.38

1.6

76.71

38.9

Associated Gene:

Gene:

PRIM2

Ensembl Gene ID:

ENSAPLG00000003752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003862

87391796 - 87495200

103405