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Intron Name: Anas_platyrhynchos_platyrhynchos_3_87395915_87412531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87395915 - 87412531

Intron Length:

16617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTTTTTATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGTTTTTTATTT

Flanking Amino Acid:

LEHVNLQFEAISEDLKNELA

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.1

0.9

0.7

90.1

24.5

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

60.1

0.4

1.5

74.2

37.2

Associated Gene:

Gene:

PRIM2

Ensembl Gene ID:

ENSAPLG00000003752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003862

87391796 - 87495200

103405