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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8755792_8756411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8755792 - 8756411

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

CTGGGATTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

0.6

1.2

75.9

36.3

Major PPT

90.2

0.9

0.7

85.3

28.7

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

46.9

-0.1

2.1

64.19

46.7

Associated Gene:

Gene:

RIN2

Ensembl Gene ID:

ENSAPLG00000014865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021743

8755717 - 8840228

84512