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Intron Name: Anas_platyrhynchos_platyrhynchos_3_87994751_88053419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87994751 - 88053419

Intron Length:

58669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGTAA

5'SS Class:

major

3'SS Sequence:

TCTTACTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TCTTTCTTACTT

Flanking Amino Acid:

VLIPVKQYPKFNFVGKLLGP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

81.3

0.7

0.8

73.6

36.6

Minor 5ss

40.5

-1.1

3.4

55.4

48.8

Minor BPS

69.1

0.68

1.6

82.74

39.5

Associated Gene:

Gene:

KHDRBS2

Ensembl Gene ID:

ENSAPLG00000013452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014003

87778128 - 88120857

342730