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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8817724_8818909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8817724 - 8818909

Intron Length:

1186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCACAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCTTCCACAACA

Flanking Amino Acid:

FRLIAFYCISRDVLPFTLKL

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

72.3

0.5

0.9

67.2

32.5

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

62.9

0.4

1.9

76.88

39.9

Associated Gene:

Gene:

RIN2

Ensembl Gene ID:

ENSAPLG00000014865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018188

8694950 - 8840228

145279

ENSAPLT00000036550

8694950 - 8840228

145279

ENSAPLT00000015501

8793175 - 8840923

47749

ENSAPLT00000025864

8694950 - 8840228

145279

ENSAPLT00000013593

8694950 - 8840228

145279

ENSAPLT00000024235

8703119 - 8840228

137110

ENSAPLT00000021743

8755717 - 8840228

84512

ENSAPLT00000044933

8755717 - 8840923

85207