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Intron Name: Anas_platyrhynchos_platyrhynchos_3_88187338_88187895_R

Intron Information:

Intron Rank:

145675

Intron Class:

major

Intron Phase:

Intron Coordinates:

88187338 - 88187895

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

TCTGCTTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

85.3

0.79

0.8

79.4

32.6

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

60.6

0.33

1.8

70.62

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035852

88160336 - 88209525

49190