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Intron Name: Anas_platyrhynchos_platyrhynchos_3_88562766_88564509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88562766 - 88564509

Intron Length:

1744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TAATCTGTCATT

Flanking Amino Acid:

SKNIPSRFFHEKAIHGVAMP

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.8

0.56

0.9

72.5

37.7

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

46.9

-0.1

2.3

69.35

42.2

Associated Gene:

Gene:

LGSN

Ensembl Gene ID:

ENSAPLG00000006068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033982

88561466 - 88607426

45961

ENSAPLT00000032826

88561466 - 88583407

21942

ENSAPLT00000006285

88561466 - 88616499

55034