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Intron Name: Anas_platyrhynchos_platyrhynchos_3_88606702_88606806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

88606702 - 88606806

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CATTCATCAAGA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.9

30.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

42.3

-0.9

3.1

58.2

40.1

Minor BPS

-0.1

2.1

62.13

43.6

Associated Gene:

Gene:

LGSN

Ensembl Gene ID:

ENSAPLG00000006068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033982

88561466 - 88607426

45961