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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8870152_8871264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8870152 - 8871264

Intron Length:

1113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

QRVSKPAMKGGTRKIKHQER

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

62.7

0.32

1.2

33.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

APLF

Ensembl Gene ID:

ENSAPLG00000009117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009492

8852079 - 8874658

22580