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Intron Name: Anas_platyrhynchos_platyrhynchos_3_88702773_88711306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

88702773 - 88711306

Intron Length:

8534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

TCGCATCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TTGGCCTGATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

72.6

0.51

0.9

65.1

36.1

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

56.4

0.28

1.9

76.69

45.7

Associated Gene:

Gene:

PHF3

Ensembl Gene ID:

ENSAPLG00000006219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033108

88702504 - 88742213

39710