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Intron Name: Anas_platyrhynchos_platyrhynchos_3_88711463_88712037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

88711463 - 88712037

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

GTTTTAGGATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

73.6

37.4

Major BPS

75.6

0.64

1.5

34.5

Major PPT

87.2

0.84

0.8

80.5

Minor 5ss

28.4

-2.5

2.9

41.8

Minor BPS

41.3

-0.5

2.4

66.46

43.9

Associated Gene:

Gene:

PHF3

Ensembl Gene ID:

ENSAPLG00000006219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033570

88709813 - 88746528

36716

ENSAPLT00000033108

88702504 - 88742213

39710