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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8871389_8872201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8871389 - 8872201

Intron Length:

813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTCCT

5'SS Class:

major

3'SS Sequence:

AATAATGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TAAACAGTAAAT

Flanking Amino Acid:

RQNDSNSTLLVPPYDDENEQ

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

64.1

41.7

Major BPS

71.2

0.53

70.3

31.9

Major PPT

68.1

0.41

1.1

62.6

47.2

Minor 5ss

30.2

-2.3

3.2

38.5

40.7

Minor BPS

-0.3

2.3

65.99

43.4

Associated Gene:

Gene:

APLF

Ensembl Gene ID:

ENSAPLG00000009117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009492

8852079 - 8874658

22580