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Intron Name: Anas_platyrhynchos_platyrhynchos_3_88725479_88726754_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88725479 - 88726754

Intron Length:

1276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

GTGTATATAAAT

Flanking Amino Acid:

GKHKVKIFRRESGDGKNLSE

Intron Amino Acid Position:

867

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

82.3

32.2

Major BPS

74.5

0.61

79.6

29.1

Major PPT

81.2

0.7

0.9

78.6

39.1

Minor 5ss

44.3

-0.6

2.8

53.4

43.8

Minor BPS

48.3

-0

1.9

68.18

42.1

Associated Gene:

Gene:

PHF3

Ensembl Gene ID:

ENSAPLG00000006219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025702

88702478 - 88742282

39805

ENSAPLT00000006472

88702478 - 88746528

44051

ENSAPLT00000033570

88709813 - 88746528

36716

ENSAPLT00000033108

88702504 - 88742213

39710