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Intron Name: Anas_platyrhynchos_platyrhynchos_3_88729973_88731894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

88729973 - 88731894

Intron Length:

1922

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGATTT

5'SS Class:

major

3'SS Sequence:

CCTGTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCATAT

U12 Branch Point Sequence:

CTGTTTTTACAG

Flanking Amino Acid:

AAWRLRENRHTIEMIEKEQR

Intron Amino Acid Position:

1068

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

77.6

33.4

Major BPS

74.2

0.6

69.3

38.4

Major PPT

84.8

0.78

0.8

78.9

33.1

Minor 5ss

39.8

-1.1

3.3

55.6

42.2

Minor BPS

47.6

-0.3

1.8

51.07

Associated Gene:

Gene:

PHF3

Ensembl Gene ID:

ENSAPLG00000006219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033108

88702504 - 88742213

39710

ENSAPLT00000025702

88702478 - 88742282

39805

ENSAPLT00000006472

88702478 - 88746528

44051

ENSAPLT00000033570

88709813 - 88746528

36716